Introduction | The smoothROC() function | Arguments | Returned value | Method overview | Kernel CDF estimators and the smooth ROC curve | Bandwidth selection strategies | AUC estimation and kernel DeLong-type variance | Youden index and optimal cutoff | Bootstrap percentile confidence intervals | Example: Duchenne muscular dystrophy dataset | Displaying the result | Advanced options | Log transformation | Controlling the ROC grid | Choosing a bandwidth method | References
Package: smoothROC 0.1.0
smoothROC: Kernel-Smoothed ROC and AUC with Bandwidth Selection
Computes kernel-smoothed receiver operating characteristic (ROC) curves and area under the curve (AUC), including confidence intervals, using several bandwidth selection methods. Also provides the Youden index with confidence intervals, the Youden point, and optimal diagnostic cutoff estimation. Supports Gaussian, Biweight, and Epanechnikov kernels.
Authors:
smoothROC_0.1.0.tar.gz
smoothROC_0.1.0.zip(r-4.7-any)smoothROC_0.1.0.zip(r-4.6-any)smoothROC_0.1.0.zip(r-4.5-any)
smoothROC_0.1.0.tgz(r-4.6-any)smoothROC_0.1.0.tgz(r-4.5-any)
smoothROC_0.1.0.tar.gz(r-4.7-any)smoothROC_0.1.0.tar.gz(r-4.6-any)
smoothROC_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
smoothROC/json (API)
| # Install 'smoothROC' in R: |
| install.packages('smoothROC', repos = c('https://khanruhul.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- dystrophy - Detection of Muscular Dystrophy Carriers
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:1b41027da4. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 112 | ||
| source / vignettes | OK | 146 | ||
| linux-release | OK | 112 | ||
| macos-release | OK | 239 | ||
| macos-oldrel | OK | 167 | ||
| windows-devel | OK | 78 | ||
| windows-release | OK | 92 | ||
| windows-oldrel | OK | 82 | ||
| wasm-release | OK | 102 |
Exports:smoothROCsmoothROCboot
Dependencies:clicpp11farverggplot2gluegtableisobandlabelinglifecycleR6RColorBrewerrlangS7scalesvctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Detection of Muscular Dystrophy Carriers | dystrophy |
| Kernel-Smoothed ROC Curves with AUC and Youden Index Summary | plot.smoothROC print.smoothROC smoothROC summary.smoothROC |
| Bootstrap Percentile Confidence Intervals for the Youden Index, Cutoff, and AUC | print.smoothROCboot smoothROCboot |